STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U3W4alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (817 aa)    
Predicted Functional Partners:
A0A316UDQ4
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
  
0.947
A0A316U8T7
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
  
0.802
A0A316UCA5
Alpha-glucosidase II; Belongs to the glycosyl hydrolase 31 family.
     
 0.723
A0A316UB71
Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.582
A0A316UFL7
COG4-domain-containing protein.
    
  0.435
A0A316U6Y1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.
      
 0.418
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.