STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U448ARM repeat-containing protein. (1017 aa)    
Predicted Functional Partners:
A0A316U806
SAC domain-containing protein.
    
 0.979
A0A316U2Z8
Uncharacterized protein.
  
 
 0.939
A0A316U1L0
PIPK domain-containing protein.
    
 0.926
A0A316U413
Putative RAD54-DNA-dependent ATPase of the Snf2p family.
 
  
   0.903
A0A316UDY1
Pam17-domain-containing protein.
    
 0.880
A0A316U4P3
WD40 repeat-like protein.
    
 
 0.739
A0A316U964
Tyrosine--tRNA ligase.
      
 0.536
A0A316U7P1
MBOAT-domain-containing protein; Belongs to the membrane-bound acyltransferase family.
      
 0.512
A0A316U855
DnaJ-domain-containing protein.
      
 0.512
A0A316UC02
UCH-domain-containing protein; Belongs to the peptidase C19 family.
      
 0.438
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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