STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U494Uncharacterized protein. (810 aa)    
Predicted Functional Partners:
A0A316UCS1
SNF5-domain-containing protein.
    
 
 0.899
A0A316U558
Uncharacterized protein.
    
 
 0.895
A0A316UJB5
Bromodomain-containing protein.
    
 
 0.893
A0A316U407
SWIB domain-containing protein.
   
 
 0.838
A0A316UAF2
BAH domain-containing protein.
    
 
 0.835
A0A316UAZ6
Uncharacterized protein.
    
 
 0.826
A0A316UCW9
Uncharacterized protein.
   
 
 0.822
A0A316U8H0
ZZ-type domain-containing protein.
   
 0.678
A0A316U1E1
Ubiquitin-like protein.
    
 0.601
A0A316U8C8
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.595
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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