STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U4T0P-loop containing nucleoside triphosphate hydrolase protein. (717 aa)    
Predicted Functional Partners:
A0A316U830
Uncharacterized protein.
    
 
 0.798
A0A316UHC1
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 
 0.767
A0A316U5M3
Uncharacterized protein.
    
 
 0.663
A0A316UIT5
Ribonuclease H-like protein.
    
 
 0.624
A0A316TX11
UvrD/REP type DNA helicase.
    
 
 0.570
A0A316TXU7
HD domain-containing protein.
     
 0.526
A0A316U4R3
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
   
 0.525
A0A316UET1
Rad51-domain-containing protein.
  
 
 0.493
A0A316U4F1
DNA polymerase.
    
 
 0.484
A0A316UD36
Putative CDC31-spindle pole body component, centrin.
 
      0.481
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.