STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U4W8Uncharacterized protein. (470 aa)    
Predicted Functional Partners:
A0A316UHA5
Putative cysteine synthase.
 
 0.951
A0A316UMA5
PALP-domain-containing protein.
 
 0.920
A0A316TZF0
Putative MET6-methionine synthase.
  
 
 0.907
A0A316UEF7
UROD/MetE-like protein.
  
 
 0.880
A0A316UC13
PLP-dependent transferase.
  
  
 0.876
A0A316UC14
Rhodanese-like protein.
  
 
 0.868
A0A316UBY4
Tryptophan synthase.
  
 
 0.867
A0A316UC70
Homocysteine S-methyltransferase.
  
 
 0.865
A0A316U4S5
Cystathionine gamma-synthase.
  
  
0.834
A0A316U7C0
Aspartate aminotransferase.
   
 
 0.830
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.