STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U5E1DUF572-domain-containing protein. (369 aa)    
Predicted Functional Partners:
A0A316U4Y6
Helicase C-terminal domain-containing protein.
   
 0.995
A0A316UFM5
Pre-mRNA splicing factor.
    
 0.994
A0A316U291
Uncharacterized protein.
   
 0.989
A0A316U5P2
TPR-like protein.
    
 
 0.988
A0A316U9Q8
Uncharacterized protein.
    
 
 0.988
A0A316UF27
WD40 repeat-like protein.
    
 
 0.988
A0A316U2S4
Bud site selection-related protein.
    
 
 0.986
A0A316UFR3
Putative ATP dependent RNA helicase.
    
 
 0.985
A0A316UEV7
MIF4G-domain-containing protein.
    
 0.984
A0A316UB98
SYF2-domain-containing protein.
    
 0.980
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.