STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U5E7PAPA-1 domain-containing protein. (362 aa)    
Predicted Functional Partners:
A0A316U1T5
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.978
A0A316UA97
Actin-like ATPase domain-containing protein; Belongs to the actin family.
    
 0.963
A0A316UA21
YL1_C domain-containing protein.
    
 0.946
A0A316U4Y5
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.944
A0A316UAN5
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.865
A0A316U2R5
Uncharacterized protein.
    
  0.858
A0A316U6I9
Histone H2B; Belongs to the histone H2B family.
    
   0.833
A0A316UFF0
Actin/actin-like protein; Belongs to the actin family.
    
 0.755
A0A316UFS0
Uncharacterized protein.
    
 0.744
A0A316U8N8
Histone H2A; Belongs to the histone H2A family.
    
   0.743
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.