STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U5Z7Uncharacterized protein. (1064 aa)    
Predicted Functional Partners:
A0A316TX30
Ubiquitin carboxyl-terminal hydrolase.
    
  0.619
A0A316UCL2
Putative CDC48-microsomal protein of CDC48/PAS1/SEC18 family of ATPase; Belongs to the AAA ATPase family.
    
 0.609
A0A316UHJ2
AAA-domain-containing protein.
    
 0.609
A0A316TYP1
ABC transporter domain-containing protein.
    
 0.571
A0A316U0G7
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.571
A0A316UC52
Uncharacterized protein.
    
 0.571
A0A316UD18
ABC transporter domain-containing protein.
    
 0.571
A0A316U093
Zn(2)-C6 fungal-type domain-containing protein.
   
 0.569
A0A316U0K8
DUF1445-domain-containing protein.
   
 0.569
A0A316UAW7
Zn(2)-C6 fungal-type domain-containing protein.
   
 0.569
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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