STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U784Uncharacterized protein. (181 aa)    
Predicted Functional Partners:
A0A316U3L9
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.867
A0A316TZY0
Putative YPT6-GTP-binding protein of the rab family.
  
 
0.702
A0A316UG95
FAD/NAD(P)-binding domain-containing protein.
     
 0.697
A0A316U990
Uncharacterized protein.
  
 
  0.682
A0A316UAG5
Protein prenylyltransferase.
    
 0.682
A0A316UDU8
Uncharacterized protein.
  
0.679
A0A316UBR2
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
     
 0.653
A0A316U5X5
Putative GTP-binding protein ypt1.
  
0.646
A0A316U740
Putative ARL1-ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
   
 0.645
A0A316U9W4
Actin-like ATPase domain-containing protein; Belongs to the actin family.
   
 
 0.642
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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