STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U7B3ARM repeat-containing protein. (1275 aa)    
Predicted Functional Partners:
A0A316U0U3
Arf-domain-containing protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.956
A0A316U4H1
Uncharacterized protein.
  
  
 0.794
A0A316UIV2
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
  
 0.794
A0A316U1D1
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.750
A0A316UE49
C-CAP/cofactor C-like domain-containing protein.
    
 0.745
A0A316U295
CAP-Gly domain-containing protein.
    
 0.720
A0A316UGV9
Tubulin-specific chaperone A; Belongs to the TBCA family.
    
 0.709
A0A316U5B5
DNA-binding protein.
    
   0.692
A0A316UD22
Uncharacterized protein.
   
 
 0.676
A0A316U7N8
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.654
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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