STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U8I9UBX domain-containing protein. (530 aa)    
Predicted Functional Partners:
A0A316UL86
UFD1-domain-containing protein.
    
 
 0.956
A0A316U8A3
UBX domain-containing protein.
   
 0.953
A0A316U610
UBX-domain-containing protein.
    
 0.948
A0A316UCL2
Putative CDC48-microsomal protein of CDC48/PAS1/SEC18 family of ATPase; Belongs to the AAA ATPase family.
    
 0.946
A0A316UDT7
NPL4-domain-containing protein.
    
 
 0.946
A0A316UGW0
Uncharacterized protein.
    
 0.946
A0A316UHJ2
AAA-domain-containing protein.
    
 0.938
A0A316U483
PRKCSH domain-containing protein.
    
 
 0.928
A0A316UAH7
RING-CH-type domain-containing protein.
    
 
 0.887
A0A316U034
U-box domain-containing protein.
    
 
 0.872
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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