STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U940WD40 repeat-like protein. (852 aa)    
Predicted Functional Partners:
A0A316UFT5
Uncharacterized protein.
    
 
 0.926
A0A316U8D3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.868
A0A316U949
Arginase/deacetylase.
    
 0.868
A0A316U360
HTH myb-type domain-containing protein.
   
 0.867
A0A316U694
Uncharacterized protein.
   
 0.867
A0A316UGL2
Uncharacterized protein.
   
 0.867
A0A316UGR7
mRNA triphosphatase CET1.
   
 0.867
A0A316U6B2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.858
A0A316UI52
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.858
A0A316UD04
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.844
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.