STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U9I3Myb-like domain-containing protein. (176 aa)    
Predicted Functional Partners:
A0A316TXJ3
Putative YEF3-translation elongation factor eEF3.
   
   0.993
A0A316U0M0
Uncharacterized protein.
   
 0.992
A0A316U0V9
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
  
 0.992
A0A316U4Z5
Putative ribosomal protein S12, cytosolic; Belongs to the universal ribosomal protein uS19 family.
  
 0.992
A0A316U540
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.992
A0A316U779
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.992
A0A316UED7
40S ribosomal protein S17.
   
 0.992
A0A316UF26
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.992
A0A316UF88
FHA domain-containing protein.
   
 0.992
A0A316TY80
Uncharacterized protein.
   
   0.991
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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