STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316UA12WD40 repeat-like protein. (1203 aa)    
Predicted Functional Partners:
A0A316U4X1
Putative negative regulator sulfur controller-3; Belongs to the SKP1 family.
    
 0.991
A0A316U3T4
Putative SCF complex member Cullin 1; Belongs to the cullin family.
    
 0.978
A0A316U8N3
RING/U-box.
    
 0.961
A0A316U2X4
RNI-like protein.
    
 0.927
A0A316U4D3
WD40 repeat-like protein.
  
 
0.926
A0A316U2L4
BZIP domain-containing protein.
    
 
 0.903
A0A316U1X7
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.893
A0A316TX00
WD40 repeat-like protein.
   
0.858
A0A316TXK4
Kinase-like protein; Belongs to the protein kinase superfamily.
    
 0.857
A0A316TZR2
Uncharacterized protein.
    
 0.857
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.