STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316UA65Uncharacterized protein. (297 aa)    
Predicted Functional Partners:
A0A316U8B1
Uncharacterized protein.
   
 
 0.941
A0A316UFA7
Manganese and iron superoxide dismutase.
   
 
 0.931
A0A316U751
Ribosomal protein S8.
   
 
 0.924
A0A316UDL9
Ribosomal protein L15.
   
 
 0.921
A0A316TWW7
Uncharacterized protein.
   
   0.917
A0A316UH71
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.914
A0A316U3A0
Uncharacterized protein.
   
 
 0.912
A0A316U517
Ribosomal protein S2.
   
 
 0.912
A0A316U215
Ribosomal protein L5.
   
 
 0.910
A0A316U2P2
Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.909
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.