STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316UAH2S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (679 aa)    
Predicted Functional Partners:
A0A316U0V9
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 0.873
A0A316UC78
RNA-binding domain-containing protein.
   
 
 0.815
A0A316U869
Fibrillarin.
   
 
 0.807
A0A316U9L4
DUF663-domain-containing protein.
   
  0.793
A0A316UJ87
Bystin-domain-containing protein.
   
 0.785
A0A316U333
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.780
A0A316TZJ3
DEAD-domain-containing protein; Belongs to the DEAD box helicase family.
   
  0.771
A0A316TWE2
NUC173-domain-containing protein.
   
   0.753
A0A316U6R0
RNA helicase; Belongs to the DEAD box helicase family.
   
  0.746
A0A316UFE1
Uncharacterized protein.
   
 
 0.726
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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