STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316UBI3UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (234 aa)    
Predicted Functional Partners:
A0A316UBJ0
RING/U-box.
   
 0.980
A0A316UE29
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.971
A0A316U4S4
HECT domain-containing protein.
    
 0.950
A0A316UHZ2
ANAPC4 domain-containing protein.
    
 0.944
A0A316UFA5
Anaphase-promoting complex, subunit 10.
    
 0.942
A0A316U814
TPR-like protein.
    
 0.936
A0A316U823
Uncharacterized protein.
    
 0.936
A0A316UB56
TPR-like protein.
    
 0.930
A0A316U0G1
Uncharacterized protein.
    
 0.926
A0A316UCV9
ANAPC5 domain-containing protein.
    
 0.926
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.