Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| A0A316TY24 | A0A316U2A6 | Uncharacterized protein. | Putative RAD3-DNA helicase/ATPase. | 0.990 |
| A0A316TY24 | A0A316U577 | Uncharacterized protein. | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | 0.980 |
| A0A316TY24 | A0A316U853 | Uncharacterized protein. | CDK-activating kinase assembly factor. | 0.998 |
| A0A316TY24 | A0A316U9I9 | Uncharacterized protein. | TFIIE domain-containing protein. | 0.992 |
| A0A316TY24 | A0A316U9M3 | Uncharacterized protein. | Transcription factor Tfb4. | 0.996 |
| A0A316TY24 | A0A316UB06 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.969 |
| A0A316TY24 | A0A316UBJ8 | Uncharacterized protein. | Pkinase-domain-containing protein; Belongs to the protein kinase superfamily. | 0.997 |
| A0A316TY24 | A0A316UCF7 | Uncharacterized protein. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.992 |
| A0A316TY24 | A0A316UDK0 | Uncharacterized protein. | DNA repair helicase rad25. | 0.983 |
| A0A316TY24 | A0A316UEV6 | Uncharacterized protein. | Uncharacterized protein. | 0.985 |
| A0A316U2A6 | A0A316TY24 | Putative RAD3-DNA helicase/ATPase. | Uncharacterized protein. | 0.990 |
| A0A316U2A6 | A0A316U577 | Putative RAD3-DNA helicase/ATPase. | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | 0.997 |
| A0A316U2A6 | A0A316U853 | Putative RAD3-DNA helicase/ATPase. | CDK-activating kinase assembly factor. | 0.997 |
| A0A316U2A6 | A0A316U9I9 | Putative RAD3-DNA helicase/ATPase. | TFIIE domain-containing protein. | 0.994 |
| A0A316U2A6 | A0A316U9M3 | Putative RAD3-DNA helicase/ATPase. | Transcription factor Tfb4. | 0.997 |
| A0A316U2A6 | A0A316UB06 | Putative RAD3-DNA helicase/ATPase. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.967 |
| A0A316U2A6 | A0A316UBJ8 | Putative RAD3-DNA helicase/ATPase. | Pkinase-domain-containing protein; Belongs to the protein kinase superfamily. | 0.985 |
| A0A316U2A6 | A0A316UCF7 | Putative RAD3-DNA helicase/ATPase. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.993 |
| A0A316U2A6 | A0A316UDK0 | Putative RAD3-DNA helicase/ATPase. | DNA repair helicase rad25. | 0.997 |
| A0A316U2A6 | A0A316UEV6 | Putative RAD3-DNA helicase/ATPase. | Uncharacterized protein. | 0.997 |
page 1 of 6