STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316UBK2Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (846 aa)    
Predicted Functional Partners:
A0A316U1T6
Nsp1_C domain-containing protein.
   
 0.999
A0A316TZY7
Uncharacterized protein.
   
 0.998
A0A316U0R1
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.998
A0A316UD83
Protein transporter SEC13; Belongs to the WD repeat SEC13 family.
    
 0.997
A0A316U7I2
Peptidase S59 domain-containing protein.
   
 0.996
A0A316UAZ8
Nuclear pore protein.
   
 0.991
A0A316U0P3
Uncharacterized protein.
   
 0.990
A0A316UEA9
Uncharacterized protein.
   
 0.990
A0A316UAN8
Nucleoporin-domain-containing protein.
   
 0.989
A0A316UJF2
Nup54 domain-containing protein.
   
 0.984
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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