STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316UC44Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (826 aa)    
Predicted Functional Partners:
A0A316UDL7
Prolyl-tRNA synthetase.
 
 0.995
A0A316UFA6
Nucleic acid-binding protein.
 
 0.991
A0A316UCJ0
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.988
A0A316U964
Tyrosine--tRNA ligase.
  
 0.987
A0A316TYC8
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.986
A0A316U743
Putative MES1-methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.982
A0A316U102
Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.970
A0A316TYJ2
EEF1-gamma domain-containing protein.
   
 0.964
A0A316U330
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 0.957
A0A316UBU2
L30e-like protein.
   
 0.957
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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