STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS140S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (311 aa)    
Predicted Functional Partners:
A0A316TXV8
Uncharacterized protein.
   
 0.999
A0A316TXZ1
Putative 40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.999
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.999
A0A316TZK8
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.999
A0A316U025
Putative 60s ribosomal protein L7 subunit.
   
 
 0.999
A0A316U0M0
Uncharacterized protein.
   
 0.999
A0A316U0V9
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
A0A316U0Z4
Putative RPS11B-ribosomal protein S11B; Belongs to the universal ribosomal protein uS17 family.
   
 0.999
A0A316U2P9
Ribosomal protein S7; Belongs to the universal ribosomal protein uS7 family.
   
 0.999
A0A316U330
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 0.999
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.