STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316UDB0V-snare-domain-containing protein. (288 aa)    
Predicted Functional Partners:
A0A316U0T3
t-SNARE coiled-coil homology domain-containing protein.
   
 0.998
A0A316U429
t-SNARE.
   
 0.997
A0A316UBF3
Snare-like protein; Belongs to the synaptobrevin family.
    
 0.997
A0A316U7B9
V-snare-domain-containing protein.
   
 0.995
A0A316U4R9
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.993
A0A316TYX1
Putative YKT6-snare protein for endoplasmic reticulum-golgi transport; Belongs to the synaptobrevin family.
   
 0.991
A0A316UIY1
Uncharacterized protein.
    
 0.987
A0A316UF67
Uncharacterized protein.
   
 0.983
A0A316UFH6
Putative SEC17-transport vesicle fusion protein.
    
 0.897
A0A316U5B3
t-SNARE; Belongs to the syntaxin family.
    
 0.882
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.