STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316UE70Erf4 domain-containing protein. (179 aa)    
Predicted Functional Partners:
A0A316UBZ7
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.872
A0A316UD53
Putative 25 kd subunit of DNA-directed RNA polymerases I, II and III.
 
      0.707
A0A316U0X5
Subtilisin-like protein.
    
 0.666
A0A316U8R0
Subtilisin-like protein.
    
 0.666
A0A316U648
Putative ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
   
  0.588
A0A316U0N2
Putative small G-protein Ras2.
    
 0.579
A0A316U424
Putative RSR1-GTP-binding protein.
    
 0.579
A0A316UD00
Ras-like protein.
    
 0.579
A0A316U883
Ras-domain-containing protein.
    
  0.570
A0A316UJ68
Ras-domain-containing protein.
    
  0.550
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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