STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316UEV7MIF4G-domain-containing protein. (907 aa)    
Predicted Functional Partners:
A0A316UFM5
Pre-mRNA splicing factor.
   
 0.996
A0A316UDX0
DEAD-domain-containing protein.
    
 0.995
A0A316U9Q8
Uncharacterized protein.
   
 
 0.990
A0A316U2S4
Bud site selection-related protein.
   
 
 0.989
A0A316UDV4
Slu7 domain-containing protein.
   
 0.989
A0A316UFC1
Putative ribosomal elongation factor EF-2.
   
 
 0.987
A0A316UF13
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.986
A0A316UFR3
Putative ATP dependent RNA helicase.
    
 
 0.985
A0A316U5E1
DUF572-domain-containing protein.
    
 0.984
A0A316UBS0
WD40 repeat-like protein.
   
 
 0.984
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.