STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316UF32Uncharacterized protein. (410 aa)    
Predicted Functional Partners:
A0A316TXC0
Putative endoplasmic reticulum insertion protein SEC61.
    
 
 0.988
A0A316U2U0
J domain-containing protein.
    
 
 0.988
A0A316U5X0
Kinase-like protein.
    
 
 0.988
A0A316UA53
Translocation protein.
    
 
 0.978
A0A316U2F1
Protein translocase SEC6.
    
 
 0.976
A0A316UBX9
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.878
A0A316U1F3
Heat shock protein 70; Belongs to the heat shock protein 70 family.
   
 
 0.510
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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