STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316UFL7COG4-domain-containing protein. (844 aa)    
Predicted Functional Partners:
A0A316UCR5
Uncharacterized protein.
    
 0.992
A0A316U6R8
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
   
 0.989
A0A316UGP1
COG2-domain-containing protein.
   
 0.987
A0A316TZP0
Uncharacterized protein.
    
 0.983
A0A316U7G3
Uncharacterized protein.
    
 0.983
A0A316UC66
Uncharacterized protein.
    
 0.983
A0A316U429
t-SNARE.
    
 0.866
A0A316UJM2
Vps54 domain-containing protein.
    
 0.826
A0A316U9I7
V-snare-domain-containing protein.
     
 0.817
A0A316UEP5
Uncharacterized protein.
   
 
 0.814
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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