STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316UH43Metallo-dependent phosphatase. (735 aa)    
Predicted Functional Partners:
A0A316TX20
Nudix hydrolase domain-containing protein.
    
 0.787
A0A316U699
HAD-like protein.
    
 0.738
A0A316UDK1
Alpha/beta-hydrolase.
    
 0.738
A0A316U946
Nudix hydrolase domain-containing protein.
    
 0.713
A0A316UB05
Uncharacterized protein.
     
 0.674
A0A316U1V9
Putative LTP1-protein-tyrosine-phosphatase.
    
 0.670
A0A316UG02
Alkaline phosphatase.
    
 0.649
A0A316U9B2
SET domain-containing protein.
     
 0.603
A0A316U8H2
Riboflavin kinase.
    
 0.588
A0A316UEZ7
PRTase-like protein.
    
 0.544
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.