STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316UIY1Uncharacterized protein. (1188 aa)    
Predicted Functional Partners:
A0A316U429
t-SNARE.
    
 0.989
A0A316UDB0
V-snare-domain-containing protein.
    
 0.987
A0A316U7B9
V-snare-domain-containing protein.
    
 0.973
A0A316U5X5
Putative GTP-binding protein ypt1.
   
 0.964
A0A316U0T3
t-SNARE coiled-coil homology domain-containing protein.
    
 0.959
A0A316UF67
Uncharacterized protein.
    
 0.927
A0A316U4R9
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.913
A0A316UB55
GRASP55_65 domain-containing protein.
   
 0.907
A0A316TYX1
Putative YKT6-snare protein for endoplasmic reticulum-golgi transport; Belongs to the synaptobrevin family.
   
 0.878
A0A316UBL0
Uncharacterized protein.
    
 0.864
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.