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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RY69_1028Glutamate synthase [NADPH] large chain. (1523 aa)    
Predicted Functional Partners:
RY69_1027
Glutamate synthase [NADPH] small chain.
 0.999
RY69_1952
Putative NADPH-ferredoxin reductase FprA.
 
 
 0.999
RY69_2046
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.999
RY69_779
IMP dehydrogenase family protein.
  
 
 0.988
glnA
Glutamine synthetase.
  
 
 0.987
glnA-2
Glutamine synthetase, type I.
  
 
 0.987
carB
Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.
  
 
 0.983
glmS
Glutamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
 0.964
purF
Amidophosphoribosyltransferase.
    
 0.950
carA
Carbamoyl-phosphate synthase small chain; Belongs to the CarA family.
    
  0.939
Your Current Organism:
Bifidobacterium breve
NCBI taxonomy Id: 1685
Other names: AS 1.2213, ATCC 15700, B. breve, BCRC 11846, Bifidobacterium parvulorum, CCRC 11846, CCRC:11846, CCUG 18365, CCUG 30511 A, CIP 64.69, DSM 20213, HAMBI 558, LMG 11042, LMG:11042, NCAIM B.01820, NCFB 2257, NCIMB 702257, NCTC 11815
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