Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sufSCysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (424 aa)    
Predicted Functional Partners:
RY69_1054
SUF system FeS assembly protein, NifU family.
 
 
 0.996
sufC
FeS assembly ATPase SufC.
 
  
 0.974
sufB
FeS assembly protein SufB.
 
 
 0.966
sufD
FeS assembly protein SufD.
 
 
 0.965
RY69_1053
Metal-sulfur cluster biosynthetic protein.
 
  
 0.916
RY69_2011
Thioredoxin reductase/Thioredoxin/Glutaredoxin family protein.
  
 
  0.911
trxB
Thioredoxin-disulfide reductase.
  
 
  0.905
RY69_1486
Cystathionine gamma-synthase.
    
 0.903
RY69_590
Cysteine desulfurase.
  
 
0.564
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
       0.471
Your Current Organism:
Bifidobacterium breve
NCBI taxonomy Id: 1685
Other names: AS 1.2213, ATCC 15700, B. breve, BCRC 11846, Bifidobacterium parvulorum, CCRC 11846, CCRC:11846, CCUG 18365, CCUG 30511 A, CIP 64.69, DSM 20213, HAMBI 558, LMG 11042, LMG:11042, NCAIM B.01820, NCFB 2257, NCIMB 702257, NCTC 11815
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