STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RY69_11PTS system maltose-and glucose-specific EIICB component. (164 aa)    
Predicted Functional Partners:
ptbA
PTS system glucose-specific EIICBA component.
 
 0.999
ptbA-2
Glucose-specific phosphotransferase enzyme IIA component.
 
 0.999
RY69_232
Glycosyl hydrolase family 20, catalytic domain protein.
  
  
 0.989
RY69_187
PTS system mannose-specific EIIBCA component.
 
 
 0.981
nagE
PTS system, N-acetylglucosamine-specific IIBC component.
  
 
 0.974
ptsP
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
  
 
 0.910
RY69_1861
Phosphocarrier protein HPr.
  
 
 0.796
RY69_2085
PTS system, IIA component.
  
 
 0.781
RY69_1137
NagC/XylR-type transciptional regulator.
  
 
 0.733
RY69_1138
Sugar kinase, ROK family.
  
 
 0.733
Your Current Organism:
Bifidobacterium breve
NCBI taxonomy Id: 1685
Other names: AS 1.2213, ATCC 15700, B. breve, BCRC 11846, Bifidobacterium parvulorum, CCRC 11846, CCRC:11846, CCUG 18365, CCUG 30511 A, CIP 64.69, DSM 20213, HAMBI 558, LMG 11042, LMG:11042, NCAIM B.01820, NCFB 2257, NCIMB 702257, NCTC 11815
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