RY69_1158 protein (Bifidobacterium breve) - STRING interaction network

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Score

RY69_1158

Transcription activator, effector binding (Transcriptional regulator). (87 aa)

Predicted Functional Partners:

rpoA

0.934

rpoB

0.850

rpoD

0.843

rpoC

0.830

rpoZ

0.830

RY69_7

0.604

RY69_1145

0.467

RY69_609

0.416

Your Current Organism:

Bifidobacterium breve

NCBI taxonomy Id: 1685
Other names: AS 1.2213, ATCC 15700, B. breve, BCRC 11846, Bifidobacterium parvulorum, CCRC 11846, CCRC:11846, CCUG 18365, CCUG 30511 A, CIP 64.69, DSM 20213, HAMBI 558, LMG 11042, LMG:11042, NCAIM B.01820, NCFB 2257, NCIMB 702257, NCTC 11815

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RY69_1145	RY69_1158	RY69_1145	RY69_1158	Transcriptional regulator, TetR family.	Transcription activator, effector binding (Transcriptional regulator).	0.467
RY69_1158	RY69_1145	RY69_1158	RY69_1145	Transcription activator, effector binding (Transcriptional regulator).	Transcriptional regulator, TetR family.	0.467
RY69_1158	RY69_609	RY69_1158	RY69_609	Transcription activator, effector binding (Transcriptional regulator).	Acetyltransferase, GNAT family.	0.416
RY69_1158	RY69_7	RY69_1158	RY69_7	Transcription activator, effector binding (Transcriptional regulator).	Transcriptional regulator, TetR family.	0.604
RY69_1158	rpoA	RY69_1158	RY69_164	Transcription activator, effector binding (Transcriptional regulator).	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.934
RY69_1158	rpoB	RY69_1158	RY69_1530	Transcription activator, effector binding (Transcriptional regulator).	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.850
RY69_1158	rpoC	RY69_1158	RY69_1529	Transcription activator, effector binding (Transcriptional regulator).	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.830
RY69_1158	rpoD	RY69_1158	RY69_633	Transcription activator, effector binding (Transcriptional regulator).	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.843
RY69_1158	rpoZ	RY69_1158	RY69_409	Transcription activator, effector binding (Transcriptional regulator).	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.830
RY69_609	RY69_1158	RY69_609	RY69_1158	Acetyltransferase, GNAT family.	Transcription activator, effector binding (Transcriptional regulator).	0.416
RY69_7	RY69_1158	RY69_7	RY69_1158	Transcriptional regulator, TetR family.	Transcription activator, effector binding (Transcriptional regulator).	0.604
rpoA	RY69_1158	RY69_164	RY69_1158	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription activator, effector binding (Transcriptional regulator).	0.934
rpoA	rpoB	RY69_164	RY69_1530	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	RY69_164	RY69_1529	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoD	RY69_164	RY69_633	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.972
rpoA	rpoZ	RY69_164	RY69_409	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.998
rpoB	RY69_1158	RY69_1530	RY69_1158	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription activator, effector binding (Transcriptional regulator).	0.850
rpoB	rpoA	RY69_1530	RY69_164	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoC	RY69_1530	RY69_1529	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoD	RY69_1530	RY69_633	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.977

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