| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RY69_1099 | RY69_1346 | RY69_1099 | RY69_1346 | Superfamily I DNA and RNA helicase. | Putative DNA helicase II. | 0.927 |
| RY69_1099 | RY69_1522 | RY69_1099 | RY69_1522 | Superfamily I DNA and RNA helicase. | UvrD/REP helicase family protein; Belongs to the helicase family. UvrD subfamily. | 0.928 |
| RY69_1099 | dnaN | RY69_1099 | RY69_2057 | Superfamily I DNA and RNA helicase. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.713 |
| RY69_1099 | recA | RY69_1099 | RY69_623 | Superfamily I DNA and RNA helicase. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.746 |
| RY69_1099 | recQ | RY69_1099 | RY69_1485 | Superfamily I DNA and RNA helicase. | ATP-dependent DNA helicase RecQ. | 0.702 |
| RY69_1099 | topA | RY69_1099 | RY69_1865 | Superfamily I DNA and RNA helicase. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.554 |
| RY69_1099 | uvrC | RY69_1099 | RY69_966 | Superfamily I DNA and RNA helicase. | UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.703 |
| RY69_1346 | RY69_1099 | RY69_1346 | RY69_1099 | Putative DNA helicase II. | Superfamily I DNA and RNA helicase. | 0.927 |
| RY69_1346 | RY69_1347 | RY69_1346 | RY69_1347 | Putative DNA helicase II. | Phosphotransferase enzyme domain protein. | 0.684 |
| RY69_1346 | RY69_1348 | RY69_1346 | RY69_1348 | Putative DNA helicase II. | Putative ATP-binding protein. | 0.580 |
| RY69_1346 | RY69_1522 | RY69_1346 | RY69_1522 | Putative DNA helicase II. | UvrD/REP helicase family protein; Belongs to the helicase family. UvrD subfamily. | 0.928 |
| RY69_1346 | dnaN | RY69_1346 | RY69_2057 | Putative DNA helicase II. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.679 |
| RY69_1346 | dnaX | RY69_1346 | RY69_1894 | Putative DNA helicase II. | DNA polymerase III subunit gamma/tau. | 0.475 |
| RY69_1346 | recA | RY69_1346 | RY69_623 | Putative DNA helicase II. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.633 |
| RY69_1346 | recQ | RY69_1346 | RY69_1485 | Putative DNA helicase II. | ATP-dependent DNA helicase RecQ. | 0.695 |
| RY69_1346 | topA | RY69_1346 | RY69_1865 | Putative DNA helicase II. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.558 |
| RY69_1346 | uvrC | RY69_1346 | RY69_966 | Putative DNA helicase II. | UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.482 |
| RY69_1347 | RY69_1346 | RY69_1347 | RY69_1346 | Phosphotransferase enzyme domain protein. | Putative DNA helicase II. | 0.684 |
| RY69_1347 | RY69_1348 | RY69_1347 | RY69_1348 | Phosphotransferase enzyme domain protein. | Putative ATP-binding protein. | 0.732 |
| RY69_1347 | RY69_1522 | RY69_1347 | RY69_1522 | Phosphotransferase enzyme domain protein. | UvrD/REP helicase family protein; Belongs to the helicase family. UvrD subfamily. | 0.617 |