RY69_1644 protein (Bifidobacterium breve) - STRING interaction network

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RY69_1644

ATP-binding protein of ABC transporter system. (737 aa)

Predicted Functional Partners:

rplU

0.689

rpsC

0.682

rpsO

0.674

rpmD

0.672

rplT

0.672

rpmH

0.670

rpsG

0.669

rpmF

0.669

rpmA

0.669

rplC

0.664

Your Current Organism:

Bifidobacterium breve

NCBI taxonomy Id: 1685
Other names: AS 1.2213, ATCC 15700, B. breve, BCRC 11846, Bifidobacterium parvulorum, CCRC 11846, CCRC:11846, CCUG 18365, CCUG 30511 A, CIP 64.69, DSM 20213, HAMBI 558, LMG 11042, LMG:11042, NCAIM B.01820, NCFB 2257, NCIMB 702257, NCTC 11815

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RY69_1644	rplC	RY69_1644	RY69_137	ATP-binding protein of ABC transporter system.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.664
RY69_1644	rplT	RY69_1644	RY69_580	ATP-binding protein of ABC transporter system.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.672
RY69_1644	rplU	RY69_1644	RY69_30	ATP-binding protein of ABC transporter system.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.689
RY69_1644	rpmA	RY69_1644	RY69_31	ATP-binding protein of ABC transporter system.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.669
RY69_1644	rpmD	RY69_1644	RY69_155	ATP-binding protein of ABC transporter system.	50S ribosomal protein L30.	0.672
RY69_1644	rpmF	RY69_1644	RY69_1638	ATP-binding protein of ABC transporter system.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.669
RY69_1644	rpmH	RY69_1644	RY69_2059	ATP-binding protein of ABC transporter system.	50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.670
RY69_1644	rpsC	RY69_1644	RY69_143	ATP-binding protein of ABC transporter system.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.682
RY69_1644	rpsG	RY69_1644	RY69_1410	ATP-binding protein of ABC transporter system.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.669
RY69_1644	rpsO	RY69_1644	RY69_1665	ATP-binding protein of ABC transporter system.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.674
rplC	RY69_1644	RY69_137	RY69_1644	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	ATP-binding protein of ABC transporter system.	0.664
rplC	rplT	RY69_137	RY69_580	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.997
rplC	rplU	RY69_137	RY69_30	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.995
rplC	rpmA	RY69_137	RY69_31	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.997
rplC	rpmD	RY69_137	RY69_155	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L30.	0.998
rplC	rpmF	RY69_137	RY69_1638	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.972
rplC	rpmH	RY69_137	RY69_2059	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.962
rplC	rpsC	RY69_137	RY69_143	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.998
rplC	rpsG	RY69_137	RY69_1410	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.995
rplC	rpsO	RY69_137	RY69_1665	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.987

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