STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RY69_1655Aldo/keto reductase. (287 aa)    
Predicted Functional Partners:
RY69_1273
Oxidoreductase, aldo-keto reductase family.
  
  
 
0.904
RY69_1171
Phosphomethylpyrimidine kinase; Belongs to the pyridoxine kinase family.
    
  0.901
RY69_1801
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.527
RY69_872
Major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.527
RY69_1661
LemA protein.
  
    0.505
RY69_1656
Hypothetical protein.
       0.498
RY69_647
Peptidyl-prolyl cis-trans isomerase.
    
   0.497
RY69_1976
Protein phosphatase 2C.
    
   0.457
RY69_1654
Inosine-uridine preferring nucleoside hydrolase.
  
    0.448
RY69_72
Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline.
  
    0.415
Your Current Organism:
Bifidobacterium breve
NCBI taxonomy Id: 1685
Other names: AS 1.2213, ATCC 15700, B. breve, BCRC 11846, Bifidobacterium parvulorum, CCRC 11846, CCRC:11846, CCUG 18365, CCUG 30511 A, CIP 64.69, DSM 20213, HAMBI 558, LMG 11042, LMG:11042, NCAIM B.01820, NCFB 2257, NCIMB 702257, NCTC 11815
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