Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
RY69_1702Thioredoxin-like protein. (323 aa)    
Predicted Functional Partners:
RY69_1703
Hypothetical protein.
 
     0.745
RY69_2011
Thioredoxin reductase/Thioredoxin/Glutaredoxin family protein.
  
 
 0.726
trxB
Thioredoxin-disulfide reductase.
  
 
 0.708
groL
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 0.694
RY69_1704
Hypothetical protein.
 
     0.688
RY69_2082
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.630
RY69_2067
Putative integral membrane protein MviN.
 
     0.586
RY69_1345
Hydrolase domain protein.
  
     0.575
RY69_1705
Peptidyl-prolyl cis-trans isomerase.
   
   0.573
RY69_992
Phosphoglycerate mutase family protein.
 
     0.553
Your Current Organism:
Bifidobacterium breve
NCBI taxonomy Id: 1685
Other names: AS 1.2213, ATCC 15700, B. breve, BCRC 11846, Bifidobacterium parvulorum, CCRC 11846, CCRC:11846, CCUG 18365, CCUG 30511 A, CIP 64.69, DSM 20213, HAMBI 558, LMG 11042, LMG:11042, NCAIM B.01820, NCFB 2257, NCIMB 702257, NCTC 11815
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