Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RY69_1919Haloacid dehalogenase-like hydrolase. (286 aa)    
Predicted Functional Partners:
RY69_1920
Glycogen debranching enzyme GlgX.
 
     0.701
RY69_1918
Putative ABC transport system membrane protein.
 
     0.685
RY69_1922
Maltodextrin transport system permease protein malC.
 
     0.641
RY69_1921
Sugar ABC transporter, permease protein.
 
     0.624
RY69_1923
Putative sugar-binding secreted protein.
 
     0.493
RY69_1924
Putative glucan 1,6-alpha-glucosidase.
       0.446
Your Current Organism:
Bifidobacterium breve
NCBI taxonomy Id: 1685
Other names: AS 1.2213, ATCC 15700, B. breve, BCRC 11846, Bifidobacterium parvulorum, CCRC 11846, CCRC:11846, CCUG 18365, CCUG 30511 A, CIP 64.69, DSM 20213, HAMBI 558, LMG 11042, LMG:11042, NCAIM B.01820, NCFB 2257, NCIMB 702257, NCTC 11815
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