Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RY69_1978Putative penicillin-binding protein A. (488 aa)    
Predicted Functional Partners:
RY69_1977
Cell cycle protein, FtsW/RodA/SpoVE family; Belongs to the SEDS family.
 
 0.998
dacB
D-Ala-D-Ala carboxypeptidase 3 (S13) domain protein.
     
 0.949
RY69_544
Peptidoglycan synthetase FtsI, penicillin-binding protein.
  
  
0.941
RY69_1975
Putative FHA domain protein.
 
   
 0.934
ftsW
Cell division protein FtsW; Belongs to the SEDS family.
 
 0.922
RY69_1976
Protein phosphatase 2C.
  
  
 0.882
RY69_1974
FHA domain protein.
 
   
 0.875
RY69_1980
Putative serine/threonine-protein kinase PrkC.
  
  
 0.869
RY69_552
POTRA domain, FtsQ-type superfamily.
  
 
 0.847
RY69_1979
Serine/threonine-protein kinase Drp72.
  
  
 0.841
Your Current Organism:
Bifidobacterium breve
NCBI taxonomy Id: 1685
Other names: AS 1.2213, ATCC 15700, B. breve, BCRC 11846, Bifidobacterium parvulorum, CCRC 11846, CCRC:11846, CCUG 18365, CCUG 30511 A, CIP 64.69, DSM 20213, HAMBI 558, LMG 11042, LMG:11042, NCAIM B.01820, NCFB 2257, NCIMB 702257, NCTC 11815
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