STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galEUDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (340 aa)    
Predicted Functional Partners:
galT-2
Galactose-1-phosphate uridylyltransferase.
 
 
 0.997
galT
Galactose-1-phosphate uridylyltransferase.
  
 0.996
galK
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.986
glf
UDP-galactopyranose mutase.
    
 0.918
RY69_867
Putative UTP-glucose-1-phosphate uridylyltransferase.
    
 0.916
RY69_197
Phosphotransferase family.
     
 0.801
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
     
 0.690
RY69_1938
LacI-type transcriptional regulator.
  
 
 0.682
RY69_1030
LacI-type transcriptional regulator.
  
 
 0.662
RY69_1917
LacI-type transcriptional regulator.
  
 
 0.662
Your Current Organism:
Bifidobacterium breve
NCBI taxonomy Id: 1685
Other names: AS 1.2213, ATCC 15700, B. breve, BCRC 11846, Bifidobacterium parvulorum, CCRC 11846, CCRC:11846, CCUG 18365, CCUG 30511 A, CIP 64.69, DSM 20213, HAMBI 558, LMG 11042, LMG:11042, NCAIM B.01820, NCFB 2257, NCIMB 702257, NCTC 11815
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