Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RY69_2027Permease protein of ABC transporter system for sugars. (278 aa)    
Predicted Functional Partners:
RY69_2034
Solute-binding protein ABC transporter (MalE family).
 
  0.985
RY69_2026
Permease protein of ABC transporter system for sugars.
 
 
0.909
RY69_2019
Putative solute binding protein of ABC transporter.
 
   0.858
RY69_2127
ABC transporter substrate binding component.
 
   0.857
RY69_2017
Solute binding protein of ABC transporter system for sugars (MalE family).
 
   0.856
RY69_2023
Solute binding protein of ABC transporter system for sugars.
 
   0.856
RY69_2038
Putative solute binding protein of ABC transporter.
 
   0.856
RY69_2021
Maltose-binding protein.
 
   0.855
RY69_2022
ABC superfamily ATP binding cassette transporter solute-binding protein.
 
   0.854
RY69_2160
ABC transporter, permease protein.
 
 
 0.829
Your Current Organism:
Bifidobacterium breve
NCBI taxonomy Id: 1685
Other names: AS 1.2213, ATCC 15700, B. breve, BCRC 11846, Bifidobacterium parvulorum, CCRC 11846, CCRC:11846, CCUG 18365, CCUG 30511 A, CIP 64.69, DSM 20213, HAMBI 558, LMG 11042, LMG:11042, NCAIM B.01820, NCFB 2257, NCIMB 702257, NCTC 11815
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