Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RY69_2106Alpha-galactosidase. (770 aa)    
Predicted Functional Partners:
RY69_1608
Beta-galactosidase.
 
  
 0.962
RY69_1497
Beta-galactosidase.
 
  
 0.961
RY69_2048
Beta-galactosidase.
 
 
 0.938
RY69_237
Beta-galactosidase.
 
 
 0.938
RY69_483
Sucrose-6-phosphate hydrolase; Belongs to the glycosyl hydrolase 32 family.
 
  
 0.929
RY69_570
Aldose 1-epimerase family protein.
 
 
 0.926
RY69_571
Aldose 1-epimerase family protein.
 
 
 0.924
RY69_1931
Alpha-glucosidase/amylase family protein.
  
 
 0.914
RY69_1463
Glucan 1,6-alpha-glucosidase.
  
 
 0.912
RY69_2111
Glucan 1,6-alpha-glucosidase.
  
 
 0.912
Your Current Organism:
Bifidobacterium breve
NCBI taxonomy Id: 1685
Other names: AS 1.2213, ATCC 15700, B. breve, BCRC 11846, Bifidobacterium parvulorum, CCRC 11846, CCRC:11846, CCUG 18365, CCUG 30511 A, CIP 64.69, DSM 20213, HAMBI 558, LMG 11042, LMG:11042, NCAIM B.01820, NCFB 2257, NCIMB 702257, NCTC 11815
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.