Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RY69_1028 | RY69_1618 | Glutamate synthase [NADPH] large chain. | Transcriptional regulator, LacI family. | 0.610 |
RY69_1028 | RY69_1811 | Glutamate synthase [NADPH] large chain. | Transcriptional regulator. | 0.610 |
RY69_1028 | RY69_1862 | Glutamate synthase [NADPH] large chain. | Transcriptional regulator LacI family protein. | 0.610 |
RY69_1028 | RY69_2032 | Glutamate synthase [NADPH] large chain. | Transcriptional regulator, LacI family. | 0.610 |
RY69_1028 | RY69_2158 | Glutamate synthase [NADPH] large chain. | Periplasmic binding protein and sugar binding domain of the LacI family protein. | 0.610 |
RY69_1028 | RY69_357 | Glutamate synthase [NADPH] large chain. | Transcriptional regulator, LacI family. | 0.610 |
RY69_1028 | RY69_695 | Glutamate synthase [NADPH] large chain. | Putative LacI-type transcriptional regulator. | 0.610 |
RY69_1618 | RY69_1028 | Transcriptional regulator, LacI family. | Glutamate synthase [NADPH] large chain. | 0.610 |
RY69_1618 | RY69_1811 | Transcriptional regulator, LacI family. | Transcriptional regulator. | 0.771 |
RY69_1618 | RY69_1861 | Transcriptional regulator, LacI family. | Phosphocarrier protein HPr. | 0.442 |
RY69_1618 | RY69_1862 | Transcriptional regulator, LacI family. | Transcriptional regulator LacI family protein. | 0.755 |
RY69_1618 | RY69_2158 | Transcriptional regulator, LacI family. | Periplasmic binding protein and sugar binding domain of the LacI family protein. | 0.774 |
RY69_1811 | RY69_1028 | Transcriptional regulator. | Glutamate synthase [NADPH] large chain. | 0.610 |
RY69_1811 | RY69_1618 | Transcriptional regulator. | Transcriptional regulator, LacI family. | 0.771 |
RY69_1811 | RY69_1861 | Transcriptional regulator. | Phosphocarrier protein HPr. | 0.442 |
RY69_1811 | RY69_1862 | Transcriptional regulator. | Transcriptional regulator LacI family protein. | 0.735 |
RY69_1811 | RY69_2158 | Transcriptional regulator. | Periplasmic binding protein and sugar binding domain of the LacI family protein. | 0.772 |
RY69_1811 | RY69_357 | Transcriptional regulator. | Transcriptional regulator, LacI family. | 0.764 |
RY69_1811 | RY69_695 | Transcriptional regulator. | Putative LacI-type transcriptional regulator. | 0.768 |
RY69_1861 | RY69_1618 | Phosphocarrier protein HPr. | Transcriptional regulator, LacI family. | 0.442 |
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