STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RY69_478Cobalt transport protein. (783 aa)    
Predicted Functional Partners:
RY69_1331
ATP binding protein of ABC transporter.
 
 
0.991
RY69_1879
Oligopeptide transport ATP-binding protein OppD; Belongs to the binding-protein-dependent transport system permease family.
 
  
0.858
RY69_479
Membrane protein.
     
 0.842
RY69_477
CRS1 / YhbY domain protein.
       0.732
RY69_45
Putative integral membrane.
  
 
 0.727
RY69_1318
ABC-type cobalt transport system.
 
 
 0.717
RY69_480
Glycosyltransferase, group 2 family protein.
 
     0.709
RY69_1320
ABC-type cobalt transport system, permease protein.
 
  
 0.677
RY69_431
Permease protein of ABC transporter system.
 
  
 0.650
RY69_972
ATP-binding protein of ABC transporter system.
 
 
0.635
Your Current Organism:
Bifidobacterium breve
NCBI taxonomy Id: 1685
Other names: AS 1.2213, ATCC 15700, B. breve, BCRC 11846, Bifidobacterium parvulorum, CCRC 11846, CCRC:11846, CCUG 18365, CCUG 30511 A, CIP 64.69, DSM 20213, HAMBI 558, LMG 11042, LMG:11042, NCAIM B.01820, NCFB 2257, NCIMB 702257, NCTC 11815
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