Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RY69_48Propionyl-CoA carboxylase, beta subunit. (540 aa)    
Predicted Functional Partners:
RY69_47
Acetyl-CoA carboxylase alpha chain.
 
 0.999
pta
Phosphate acetyltransferase.
    
 0.905
pflB
Formate acetyltransferase.
     
  0.900
RY69_44
Biotin/lipoate A/B protein ligase family protein.
 
 
 0.885
RY69_49
Type I multifunctional fatty acid synthase.
 
 
 0.871
RY69_1436
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.835
RY69_45
Putative integral membrane.
 
     0.612
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.
  
 
 0.526
RY69_46
Hypothetical protein.
       0.465
gltA
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.448
Your Current Organism:
Bifidobacterium breve
NCBI taxonomy Id: 1685
Other names: AS 1.2213, ATCC 15700, B. breve, BCRC 11846, Bifidobacterium parvulorum, CCRC 11846, CCRC:11846, CCUG 18365, CCUG 30511 A, CIP 64.69, DSM 20213, HAMBI 558, LMG 11042, LMG:11042, NCAIM B.01820, NCFB 2257, NCIMB 702257, NCTC 11815
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