STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Cooccurrence
Coexpression
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[Homology]
Score
RY69_49Type I multifunctional fatty acid synthase. (3160 aa)    
Predicted Functional Partners:
RY69_47
Acetyl-CoA carboxylase alpha chain.
  
 
 0.987
RY69_1907
Short chain dehydrogenase.
  
 0.941
RY69_1043
Putative CoA ligase.
    
 0.903
RY69_1615
AMP-binding enzyme.
    
 0.903
RY69_379
Putative CoA ligase.
    
 0.903
RY69_781
AMP-binding enzyme.
    
 0.903
gltA
Citrate synthase; Belongs to the citrate synthase family.
    
 0.897
acpS
Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
 
   
 0.893
RY69_48
Propionyl-CoA carboxylase, beta subunit.
 
 
 0.871
RY69_223
OsmC family protein.
 
    0.727
Your Current Organism:
Bifidobacterium breve
NCBI taxonomy Id: 1685
Other names: AS 1.2213, ATCC 15700, B. breve, BCRC 11846, Bifidobacterium parvulorum, CCRC 11846, CCRC:11846, CCUG 18365, CCUG 30511 A, CIP 64.69, DSM 20213, HAMBI 558, LMG 11042, LMG:11042, NCAIM B.01820, NCFB 2257, NCIMB 702257, NCTC 11815
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