node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RY69_178 | recA | RY69_178 | RY69_623 | Putative DNA repair protein RadA. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.998 |
RY69_178 | recN | RY69_178 | RY69_1289 | Putative DNA repair protein RadA. | DNA repair protein RecN. | 0.750 |
RY69_178 | recX | RY69_178 | RY69_624 | Putative DNA repair protein RadA. | RecX-like protein; Modulates RecA activity; Belongs to the RecX family. | 0.992 |
RY69_178 | ruvC | RY69_178 | RY69_881 | Putative DNA repair protein RadA. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.434 |
RY69_1788 | recX | RY69_1788 | RY69_624 | Acetyltransferase, GNAT family. | RecX-like protein; Modulates RecA activity; Belongs to the RecX family. | 0.517 |
RY69_621 | RY69_622 | RY69_621 | RY69_622 | DNA-binding helix-turn-helix protein. | Hypothetical protein. | 0.658 |
RY69_621 | recA | RY69_621 | RY69_623 | DNA-binding helix-turn-helix protein. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.635 |
RY69_621 | recX | RY69_621 | RY69_624 | DNA-binding helix-turn-helix protein. | RecX-like protein; Modulates RecA activity; Belongs to the RecX family. | 0.554 |
RY69_622 | RY69_621 | RY69_622 | RY69_621 | Hypothetical protein. | DNA-binding helix-turn-helix protein. | 0.658 |
RY69_622 | recA | RY69_622 | RY69_623 | Hypothetical protein. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.624 |
RY69_622 | recX | RY69_622 | RY69_624 | Hypothetical protein. | RecX-like protein; Modulates RecA activity; Belongs to the RecX family. | 0.624 |
dapF | hflX | RY69_1351 | RY69_533 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.719 |
dapF | recX | RY69_1351 | RY69_624 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | RecX-like protein; Modulates RecA activity; Belongs to the RecX family. | 0.719 |
hflX | dapF | RY69_533 | RY69_1351 | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.719 |
hflX | recX | RY69_533 | RY69_624 | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | RecX-like protein; Modulates RecA activity; Belongs to the RecX family. | 0.690 |
recA | RY69_178 | RY69_623 | RY69_178 | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Putative DNA repair protein RadA. | 0.998 |
recA | RY69_621 | RY69_623 | RY69_621 | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | DNA-binding helix-turn-helix protein. | 0.635 |
recA | RY69_622 | RY69_623 | RY69_622 | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Hypothetical protein. | 0.624 |
recA | recN | RY69_623 | RY69_1289 | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | DNA repair protein RecN. | 0.919 |
recA | recO | RY69_623 | RY69_1336 | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.664 |