Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RY69_1266 | RY69_1487 | RY69_1266 | RY69_1487 | L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Cysteine synthase A. | 0.916 |
RY69_1266 | RY69_255 | RY69_1266 | RY69_255 | L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Haloacid dehalogenase domain protein hydrolase. | 0.908 |
RY69_1266 | ilvA | RY69_1266 | RY69_2113 | L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Threonine ammonia-lyase. | 0.948 |
RY69_1266 | serB | RY69_1266 | RY69_414 | L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Phosphoserine phosphatase SerB. | 0.908 |
RY69_1266 | trpA | RY69_1266 | RY69_849 | L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.904 |
RY69_1266 | trpB | RY69_1266 | RY69_848 | L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine; Belongs to the TrpC family. | 0.900 |
RY69_1487 | RY69_1266 | RY69_1487 | RY69_1266 | Cysteine synthase A. | L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.916 |
RY69_1487 | RY69_255 | RY69_1487 | RY69_255 | Cysteine synthase A. | Haloacid dehalogenase domain protein hydrolase. | 0.923 |
RY69_1487 | ilvA | RY69_1487 | RY69_2113 | Cysteine synthase A. | Threonine ammonia-lyase. | 0.955 |
RY69_1487 | serB | RY69_1487 | RY69_414 | Cysteine synthase A. | Phosphoserine phosphatase SerB. | 0.954 |
RY69_1487 | trpA | RY69_1487 | RY69_849 | Cysteine synthase A. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.929 |
RY69_1487 | trpB | RY69_1487 | RY69_848 | Cysteine synthase A. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine; Belongs to the TrpC family. | 0.910 |
RY69_1981 | trpA | RY69_1981 | RY69_849 | Anthranilate synthase component II. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.960 |
RY69_1981 | trpB | RY69_1981 | RY69_848 | Anthranilate synthase component II. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine; Belongs to the TrpC family. | 0.998 |
RY69_1981 | trpD | RY69_1981 | RY69_627 | Anthranilate synthase component II. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.998 |
RY69_1981 | trpE | RY69_1981 | RY69_792 | Anthranilate synthase component II. | Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...] | 0.999 |
RY69_255 | RY69_1266 | RY69_255 | RY69_1266 | Haloacid dehalogenase domain protein hydrolase. | L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.908 |
RY69_255 | RY69_1487 | RY69_255 | RY69_1487 | Haloacid dehalogenase domain protein hydrolase. | Cysteine synthase A. | 0.923 |
RY69_255 | ilvA | RY69_255 | RY69_2113 | Haloacid dehalogenase domain protein hydrolase. | Threonine ammonia-lyase. | 0.906 |
RY69_255 | serB | RY69_255 | RY69_414 | Haloacid dehalogenase domain protein hydrolase. | Phosphoserine phosphatase SerB. | 0.900 |
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