Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KUF08775.1 | KUF08778.1 | AVJ23_20880 | AVJ23_20895 | Cytochrome B562; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.999 |
| KUF08775.1 | KUF09284.1 | AVJ23_20880 | AVJ23_18710 | Cytochrome B562; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.916 |
| KUF08775.1 | KUF11497.1 | AVJ23_20880 | AVJ23_06960 | Cytochrome B562; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.961 |
| KUF08775.1 | KUF11993.1 | AVJ23_20880 | AVJ23_05305 | Cytochrome B562; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome C oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.999 |
| KUF08775.1 | KUF12571.1 | AVJ23_20880 | AVJ23_02255 | Cytochrome B562; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.998 |
| KUF08775.1 | KUF12572.1 | AVJ23_20880 | AVJ23_02260 | Cytochrome B562; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
| KUF08775.1 | KUF12616.1 | AVJ23_20880 | AVJ23_02545 | Cytochrome B562; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. | 0.908 |
| KUF08775.1 | KUF12617.1 | AVJ23_20880 | AVJ23_02550 | Cytochrome B562; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.889 |
| KUF08778.1 | KUF08775.1 | AVJ23_20895 | AVJ23_20880 | Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome B562; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KUF08778.1 | KUF09284.1 | AVJ23_20895 | AVJ23_18710 | Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.991 |
| KUF08778.1 | KUF10329.1 | AVJ23_20895 | AVJ23_13060 | Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.566 |
| KUF08778.1 | KUF11497.1 | AVJ23_20895 | AVJ23_06960 | Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.935 |
| KUF08778.1 | KUF11993.1 | AVJ23_20895 | AVJ23_05305 | Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome C oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.999 |
| KUF08778.1 | KUF12571.1 | AVJ23_20895 | AVJ23_02255 | Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.992 |
| KUF08778.1 | KUF12572.1 | AVJ23_20895 | AVJ23_02260 | Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
| KUF08778.1 | KUF12616.1 | AVJ23_20895 | AVJ23_02545 | Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. | 0.911 |
| KUF08778.1 | KUF12617.1 | AVJ23_20895 | AVJ23_02550 | Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.899 |
| KUF08778.1 | napA | AVJ23_20895 | AVJ23_19170 | Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | 0.608 |
| KUF09284.1 | KUF08775.1 | AVJ23_18710 | AVJ23_20880 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome B562; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.916 |
| KUF09284.1 | KUF08778.1 | AVJ23_18710 | AVJ23_20895 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.991 |
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