STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUF10978.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)    
Predicted Functional Partners:
KUF10909.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
KUF10977.1
Carbohydrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.978
KUF10908.1
Nitrous-oxide reductase; Reduces nitrous oxide to nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.974
KUF10910.1
Copper resistance protein CopZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.974
KUF10907.1
4Fe-4S binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.971
KUF10979.1
Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
     0.932
KUF11799.1
Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.905
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.901
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.889
KUF11864.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
   
 
0.878
Your Current Organism:
Ponticoccus marisrubri
NCBI taxonomy Id: 1685382
Other names: ACCC19863, JCM 19520, P. marisrubri, Ponticoccus marisrubri Zhang et al. 2017, Ponticoccus sp. SJ5A-1, strain SJ5A-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.