STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUF08975.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)    
Predicted Functional Partners:
KUF08974.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.758
KUF10174.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.751
KUF08976.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.541
KUF10966.1
Sulfatase modifying factor 1 (C-alpha-formyglycine- generating enzyme 1); Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.494
KUF08971.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.482
KUF08972.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.482
KUF08973.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.482
KUF11086.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.436
Your Current Organism:
Ponticoccus marisrubri
NCBI taxonomy Id: 1685382
Other names: ACCC19863, JCM 19520, P. marisrubri, Ponticoccus marisrubri Zhang et al. 2017, Ponticoccus sp. SJ5A-1, strain SJ5A-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.